BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D11SP1|AL426686
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1791 1624 0.0
>3x_Contig1791
Length = 39945
Score = 1624 bits (819), Expect = 0.0
Identities = 819/819 (100%)
Strand = Plus / Minus
Query: 1 gatcaatagtattttctgctccaagcagtcacactatatttccttaacgtattgaagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 gatcaatagtattttctgctccaagcagtcacactatatttccttaacgtattgaagtac 4442
Query: 61 taacgaaatcacttagatacacaaacaacaaccagtaaatgattgttttgtactactctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 taacgaaatcacttagatacacaaacaacaaccagtaaatgattgttttgtactactctg 4382
Query: 121 gagtttatctatagagaacatatatttttactctgttgacattacttcaaattcttgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 gagtttatctatagagaacatatatttttactctgttgacattacttcaaattcttgcaa 4322
Query: 181 ctcgctttaaaatgaagaaatccaaaacaagaaaatgttacccggtagaaatgatagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 ctcgctttaaaatgaagaaatccaaaacaagaaaatgttacccggtagaaatgatagaat 4262
Query: 241 cgcaatctgtctctagataccgcgacagcttaccataacactttgactggtacactgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 cgcaatctgtctctagataccgcgacagcttaccataacactttgactggtacactgatc 4202
Query: 301 gtgagcatggacctctgcactattcgttgaggaatacaatcgaatgacgactacatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 gtgagcatggacctctgcactattcgttgaggaatacaatcgaatgacgactacatatat 4142
Query: 361 gcgactaaatgcttgtaattaattatgcgaatgtatttttccgcaaaacttggtgaaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 gcgactaaatgcttgtaattaattatgcgaatgtatttttccgcaaaacttggtgaaaga 4082
Query: 421 tcaattcattatgaatatgaggatggtcctatcaaacaaagactattcgctgcgttgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 tcaattcattatgaatatgaggatggtcctatcaaacaaagactattcgctgcgttgcat 4022
Query: 481 tatcagaagttaaactcattacgaaattgctgtagatccatgcccggcatgactttttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 tatcagaagttaaactcattacgaaattgctgtagatccatgcccggcatgactttttct 3962
Query: 541 agcaaatctctcctatccatggcgacaaaggaacgctttaaggtctccagaatattgtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 agcaaatctctcctatccatggcgacaaaggaacgctttaaggtctccagaatattgtta 3902
Query: 601 gattgcacgactgatccagtaattggaacattctctacttcatgcatagatagagcagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 gattgcacgactgatccagtaattggaacattctctacttcatgcatagatagagcagag 3842
Query: 661 agcagagactctgcagcctctttataacagccaatattcattgacgaaatggccaagtta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 agcagagactctgcagcctctttataacagccaatattcattgacgaaatggccaagtta 3782
Query: 721 taacgagctctcacaaaagacggtttcaaggcaagggccttgtggtatgcctggatagct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 taacgagctctcacaaaagacggtttcaaggcaagggccttgtggtatgcctggatagct 3722
Query: 781 tcttcgctacggtttgaattggccaaagaggctcccaaa 819
|||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 tcttcgctacggtttgaattggccaaagaggctcccaaa 3683
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5906
Number of Sequences: 1807
Number of extensions: 5906
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)